Pair wise correlations using pearson spearman coefficients | Jupyter Notebook | R Data Science

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Pair wise correlations using Pearson and Spearman coefficients in R are used to measure the strength and direction of the linear relationship between two variables. In this essay, we will go over the steps needed to calculate pair wise correlations using Pearson and Spearman coefficients in R.

The first step is to load the data into R. This can be done using the read.csv() function, which allows you to load data from a CSV file, or by using the read.table() function, which allows you to load data from a tab-separated file. Once the data is loaded, it’s important to make sure that the variables are in the correct format, such as numeric for continuous variables and factors for categorical variables.

The next step is to calculate the pair wise correlations using Pearson and Spearman coefficients. The Pearson coefficient, also known as Pearson’s correlation coefficient, measures the strength and direction of a linear relationship between two variables. It ranges from -1 to 1, where -1 indicates a perfect negative correlation, 0 indicates no correlation, and 1 indicates a perfect positive correlation.

The Spearman coefficient, also known as the Spearman’s rank-order correlation coefficient, measures the strength and direction of a monotonic relationship between two variables. It ranges from -1 to 1, where -1 indicates a perfect negative correlation, 0 indicates no correlation, and 1 indicates a perfect positive correlation. Unlike Pearson’s correlation, Spearman’s correlation can be used for ordinal or ranked data.

In R, the pair wise correlations using Pearson and Spearman coefficients can be calculated using the cor() function. The cor() function can be applied to a data frame or a matrix, and it has an argument called method, which can be set to “pearson” or “spearman” to calculate the corresponding coefficients.

It’s important to note that when calculating pair wise correlations, it’s important to keep in mind that correlation does not imply causation. Correlation only indicates that there is a relationship between two variables but it doesn’t indicate the direction or cause of the relationship. Additionally, it’s important to keep in mind that correlation coefficients may not be appropriate for non-linear relationships.

In conclusion, pair wise correlations using Pearson and Spearman coefficients in R are used to measure the strength and direction of the linear relationship between two variables. The Pearson coefficient measures the strength and direction of a linear relationship, and the Spearman coefficient measures the strength and direction of a monotonic relationship. In R, the pair wise correlations can be calculated using the cor() function, and it has an argument called method, which can be set to “pearson” or “spearman” to calculate the corresponding coefficients. It’s important to keep in mind that correlation does not imply causation and correlation coefficients may not be appropriate for non-linear relationships.

 

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